Search

James Richmond Faeder

from Pittsburgh, PA
Age ~55
Get Report
Also known as:
James R Faeder, James E Faeder, Jim Faeder
Phone and address:
5512 Woodmont St, Pittsburgh, PA 15217
Related to:
Adina Faeder, 22
Connected to:
Glenn Faegenburg, 59Stephanie U Faegenburg, 58Jeanine Faegre, 64Sharon M Faeh, 74Truman W Faeh, 36Jon E Faehn, 61Mike Faehner, 81Todd M Faehner, 49Cassie Faehr, 48Anja A Faehse, 42

James Faeder Phones & Addresses

  • 5512 Woodmont St, Pittsburgh, PA 15217
  • 3391 Cripple Creek Sq, Boulder, CO 80305
  • 1018 Don Diego Ave, Santa Fe, NM 87505
  • Roxbury, MA
  • Bellevue, WA

Industries

Higher Education

Resumes

Resumes

James Faeder Photo 1

Associate Professor At University Of Pittsburgh

View page
Location:
Greater Pittsburgh Area
Industry:
Higher Education

Publications

Us Patents

Graphical Rule Based Modeling Of Biochemical Networks

View page
US Patent:
20070212719, Sep 13, 2007
Filed:
Mar 12, 2007
Appl. No.:
11/685114
Inventors:
William Hlavacek - Santa Fe NM, US
James Faeder - Santa Fe NM, US
Michael Blinov - Avon CT, US
Assignee:
LOS ALAMOS NATIONAL SECURITY - Los Alamos NM
International Classification:
C12Q 1/68
G06F 19/00
US Classification:
435006000, 702020000
Abstract:
Formalized graphical reaction rules and conventions accounting for chemical states and binding or reaction states are provided for modeling complex biological systems such as signal transduction pathways. A system model is derived by defining typed attributed graphs which delimit molecular entities and their possible states. Graph transformation rules defining a class of potential reactions are defined and applied to the graphs and all new graphs that subsequently arise as a result of graph transformation. In one embodiment, a model is generated through the use of graph-rewriting rules which are associated with rate laws and applied iteratively to a seed set of chemical species graphs until a termination condition occurs.

Rule-Based Modeling Of Biochemical Networks

View page
US Patent:
20050042663, Feb 24, 2005
Filed:
Aug 19, 2004
Appl. No.:
10/922703
Inventors:
Michael Blinov - Los Alamos NM, US
James Faeder - Santa Fe NM, US
William Hlavacek - Santa Fe NM, US
International Classification:
C12Q001/68
G06G007/48
G06G007/58
US Classification:
435006000, 703011000
Abstract:
A method for the automatic generation of mathematical/computational models that account comprehensively and precisely for the full spectrum of chemical species implied by user-specified activities, potential modifications and interactions of the molecular components of biomolecules is described. A computer-implemented system that includes software was used to generate models. The software has a user interface that allows a user to generate new models and modify existing models.
Control profile
James Richmond Faeder from Pittsburgh, PA, age ~55 Get Report